Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATGGAGGTCTCTGTCTGGC&CCATGATAGATAACCCAAAATACAAAGGAGTATGGAGACCTCCAC
..(((((((((((((((...&.)).))))))))))))).
Details
MiRNAhsa-miR-1843
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1286,1331
Score0.962
Seed1
Au0.588
Energy-22.9
Binding len18
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure