Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCGGGGCTCGGAGCCGGG&CGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
(((((((((((((((((((&.))))).).))))))))....))))).
Details
MiRNAhsa-miR-10396a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site45,93
Score0.846
Seed1
Au0.441
Energy-25.3
Binding len27
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure