Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCGGCGGCGGCTCTGGGCG&CGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGA
((((((.((((((((.(((..&.))))))))))).)))))).
Details
MiRNAhsa-miR-10400-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site45,94
Score0.846
Seed0
Au0.456
Energy-26.7
Binding len20
Me-5.714
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure