Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGCTCCCGGACGAGGCGGG&CCTGATCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCAA
.(((((((((((.(..((((((&.))))))............).)))))).............))))).
Details
MiRNAhsa-miR-10400-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1057,1111
Score0.923
Seed1
Au0.574
Energy-22.0
Binding len46
Me-6.051
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings39
Pairings in 3prime end6
PositionCDS
2D Structure