Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGGTCTGGGGCTGAAACCT&AGGGATGTTTGGCATTGTAAAAATCAGCATGCCAGACCTGAAC
(((((((((((.(((((.....&.)))))...))))))))))).
Details
MiRNAhsa-miR-11399
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2067,2110
Score0.923
Seed1
Au0.618
Energy-26.8
Binding len21
Me-7.284
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure