Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGGCTGTGTATCTCTGTGTC&GACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAA
(((((.(((((((((((((((&)))))))))).............................)).))).))))).
Details
MiRNAhsa-miR-11400
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site43,95
Score0.846
Seed0
Au0.441
Energy-22.3
Binding len52
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings42
Pairings in 3prime end8
Position5UTR
2D Structure