Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACGTCTGCGGCTGTCACG&TGGCAGCTGCTGAAGGGCA
....((((((((((((((..&))))))))))....)))).
Details
MiRNAhsa-miR-11401
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1592,1611
Score0.923
Seed0
Au0.574
Energy-20.0
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure