Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCTGAGGGCCAGGAGT&CCTGGTGACAGAGGACTGGTATTA
.((((((((((((...((((((...&))))))..)))))...))))))).
Details
MiRNAhsa-miR-3085-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site520,544
Score0.846
Seed1
Au0.603
Energy-22.0
Binding len24
Me-5.619
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure