Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTGGAGAGGTGTACTCCCA&TGGGAGGCACCTCAGATTCTTAATCCAGC
.((((((((((((.((((((&)))))))))))))..........))))).
Details
MiRNAhsa-miR-12131
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1225,1254
Score0.923
Seed1
Au0.485
Energy-24.1
Binding len29
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure