Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCTCAGGC
.(((((((((((..........&))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130689
GeneSymbolHMGB2
Binding site785,798
Score0.846
Seed1
Au0.618
Energy-16.5
Binding len13
Me-6.908
Phylopstem3.5369209166666664
Phylopflank3.487577581249999
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure