Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTTATACCATGTGTTAGGG
.(((((((((...(((((((((&)))))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130698
GeneSymbolTRPC3
Binding site7047,7069
Score0.846
Seed1
Au0.691
Energy-16.0
Binding len22
Me-11.254
Phylopstem5.526503333333334
Phylopflank5.2642569462500015
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure