Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGATGCCCTCTACTGGACCAGTGC
((((((.(((..(((((((((.&)))))))))...........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130698
GeneSymbolTRPC3
Binding site5278,5308
Score1.0
Seed0
Au0.441
Energy-26.8
Binding len30
Me-11.653
Phylopstem3.918881166666667
Phylopflank2.8979035649999996
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure