Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCTTGTTGGCCAGGC
.((((((..((((.(((((...&))))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130710
GeneSymbolLSM5
Binding site1802,1821
Score0.821
Seed1
Au0.544
Energy-20.5
Binding len19
Me-8.02
Phylopstem2.3276227166666668
Phylopflank1.1697404762500003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure