Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATAGGATGCCAGA
..((((((..(.((((((....&)))))).)..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130726
GeneSymbolCCDC149
Binding site3576,3593
Score0.846
Seed1
Au0.5
Energy-19.2
Binding len17
Me-10.603
Phylopstem2.2246863
Phylopflank3.9741626625
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure