Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGAGAGGGTATTCCTCAAGCCCAGCATCCATCTGGTGA
(((((((((((((((((((((.&)))))))))))))..........))))............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130858
GeneSymbolPPIP5K1
Binding site4494,4538
Score0.846
Seed1
Au0.441
Energy-24.8
Binding len44
Me-3.938
Phylopstem6.057953651162792
Phylopflank5.661958935000001
Longest consecutive pairings13
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure