Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTGCCAGAGCTGTGGTTGAGGAGGAGCCAGTT
.((((((((((((((((.(((.&)))..)))))............))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130859
GeneSymbolPPIP5K1
Binding site4698,4732
Score0.846
Seed1
Au0.471
Energy-26.4
Binding len34
Me-3.793
Phylopstem5.557554432142859
Phylopflank6.030761687500002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure