Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGAGAGGGTATTCCTCAAGCCCAGCATCCATCTGGTGA
(((((((((((((((((((((.&)))))))))))))..........))))............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130859
GeneSymbolPPIP5K1
Binding site4459,4503
Score0.846
Seed1
Au0.441
Energy-24.8
Binding len44
Me-3.938
Phylopstem5.6584596860465135
Phylopflank5.881439636250001
Longest consecutive pairings13
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure