Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGTCATTTTATCTACCCCAACTGCGGTTAAAGTGGCTGGAGTGG
((((((((.((((((((((((.&))))))))..........................)))).))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130925
GeneSymbolERVW-1
Binding site584,634
Score0.808
Seed1
Au0.559
Energy-21.2
Binding len50
Me-4.994
Phylopstem0.07931092105263153
Phylopflank0.09994102499999996
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end7
Position5UTR
2D Structure