Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCTTTCAGGAAGGGTCAGTT
.((((((.((((((((((((((&)))))))....))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130963
GeneSymbolNEMP1
Binding site2213,2238
Score0.846
Seed1
Au0.529
Energy-24.5
Binding len25
Me-6.107
Phylopstem0.21557644444444446
Phylopflank0.3237141899999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure