Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCTGGCTTGCTTGCCGAGCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGTGA
(((((((((((((((((((...&.)))))..))))))................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130996
GeneSymbolHMGCR
Binding site3741,3798
Score0.923
Seed1
Au0.5
Energy-24.1
Binding len39
Me-3.938
Phylopstem0.6375316594594594
Phylopflank0.8701215174999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure