Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCGCAGGAGGGCGGTCT
....((((((((((((((((..&)))).)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001131035
GeneSymbolZCCHC9
Binding site22,41
Score0.846
Seed0
Au0.353
Energy-20.5
Binding len19
Me-9.547
Phylopstem-0.5577927145555555
Phylopflank0.2180936548166666
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure