Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTGAGCTCCCCTGTAGCCAGGA
.((((((.((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001131036
GeneSymbolZCCHC9
Binding site986,1011
Score0.846
Seed1
Au0.5
Energy-15.6
Binding len12
Me-9.221
Phylopstem0.4305049666666667
Phylopflank-0.18825026749999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure