Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCGGGAAGGACAAGGGGACTGGGCACGGGGACCCCGGCCAGTGA
(((((((((((((((((.....&))))))))))..........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134363
GeneSymbolRBM20
Binding site6,50
Score0.846
Seed1
Au0.235
Energy-25.4
Binding len44
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end3
Position5UTR
2D Structure