Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCATGGGAGCTGGTGA
(((((((((((...(((((...&))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134363
GeneSymbolRBM20
Binding site5592,5610
Score0.923
Seed1
Au0.412
Energy-23.2
Binding len18
Me-9.43
Phylopstem-0.13320478181818182
Phylopflank-0.16021708500000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure