Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGGAGGCACTGTGAGCCAGGA
.((((((.((((.(((......&.))).)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134367
GeneSymbolSLC6A6
Binding site4926,4948
Score0.846
Seed1
Au0.485
Energy-19.2
Binding len17
Me-7.396
Phylopstem-0.08341299999999997
Phylopflank-0.1694637425
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure