Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAGTGAGCCAGGA
.((((((.(((..(((((....&)))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134373
GeneSymbolNT5C2
Binding site2953,2969
Score0.846
Seed1
Au0.397
Energy-17.0
Binding len16
Me-10.743
Phylopstem5.278140833333333
Phylopflank5.4210537599999995
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure