Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCGGGGTGGGATGGGGTGG
((((...(((((((((((((..&))))))))).))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134375
GeneSymbolCCNJ
Binding site3560,3582
Score0.923
Seed0
Au0.559
Energy-21.6
Binding len22
Me-11.501
Phylopstem1.8289597857142854
Phylopflank1.4123119412499998
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure