Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCGGCACAGCTGTGGCCAGGTA
(((((((.((((.(((......&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134398
GeneSymbolVAV2
Binding site2497,2520
Score0.846
Seed1
Au0.382
Energy-18.1
Binding len18
Me-7.54
Phylopstem5.755377142857142
Phylopflank4.1697199115
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure