Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATTGGATGCCAATGGTG
((((((((..(((((((.....&)))))))..)))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134408
GeneSymbolGRIN2A
Binding site4562,4582
Score0.846
Seed1
Au0.632
Energy-19.3
Binding len20
Me-6.236
Phylopstem-0.16261736999999998
Phylopflank-0.14313884375000002
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure