Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCCTGTGCCAGGG
.(((((((((....(((((...&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134462
GeneSymbolNOTO
Binding site412,429
Score0.846
Seed1
Au0.309
Energy-17.8
Binding len17
Me-12.111
Phylopstem-0.22387455555555558
Phylopflank0.4223252175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure