Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGACAGTGA
(((((..(((((((((((((((&))))))))))..........................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134468
GeneSymbolLSMEM1
Binding site1002,1049
Score0.846
Seed0
Au0.471
Energy-20.5
Binding len47
Me-7.382
Phylopstem0.04348316341463414
Phylopflank-0.17091702750000004
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure