Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGAGAAAGAACCCGAAATGCCCGGTCCCAGAGAGGAGAGCGAGG
..((.(((((((((((((....&.)))))))))))..)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134709
GeneSymbolDEK
Binding site209,255
Score0.846
Seed0
Au0.382
Energy-24.7
Binding len20
Me-9.076
Phylopstem-0.4491778666666667
Phylopflank-0.30729114125
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure