Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAACCCCCTTGGAGGAGCTGTGT
(((.(((((((((((((((...&)))))))..........))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346700
GeneSymbolSGSM2
Binding site3419,3448
Score0.846
Seed0
Au0.382
Energy-24.8
Binding len29
Me-6.97
Phylopstem0.38058303600000004
Phylopflank0.20939675124999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure