Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGACTGTGTGCCAGTGTG
((((((((((((..........&.)))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001134875
GeneSymbolTEDC1
Binding site542,563
Score0.846
Seed1
Au0.338
Energy-18.0
Binding len15
Me-7.052
Phylopstem-0.3308796923076923
Phylopflank-0.35838938499999995
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end0
PositionCDS
2D Structure