Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAAAGAAGGAGCCCCCCAGTGG
(((((((((((((((((((...&)))))))).....)))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001134888
GeneSymbolRTL1
Binding site515,544
Score0.923
Seed1
Au0.353
Energy-27.4
Binding len29
Me-3.938
Phylopstem1.3981161142857146
Phylopflank0.3239719099999999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
PositionCDS
2D Structure