Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCGGACATTGGTGCCAA
...((((((.((((((((((((&))))))...)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135058
GeneSymbolCOCH
Binding site1572,1594
Score0.923
Seed0
Au0.588
Energy-17.5
Binding len22
Me-7.757
Phylopstem2.8802036
Phylopflank4.43123520125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure