Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCAT
.((((((((((((.((..((.&.))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346700
GeneSymbolSGSM2
Binding site1563,1621
Score1.0
Seed1
Au0.353
Energy-24.6
Binding len21
Me-4.65
Phylopstem3.0295222500000007
Phylopflank2.5191840974999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure