Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTACAGTGTTTGCA
.....(((.(((.(((((((((&))))))))).))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135098
GeneSymbolUPP2
Binding site956,974
Score0.923
Seed0
Au0.574
Energy-16.6
Binding len18
Me-16.011
Phylopstem4.607794222222222
Phylopflank3.0331518604999994
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure