Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCAGGCTGCAGTGGCTCC
.(((((((((((((...(((.&))).))))))))).)).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001135099
GeneSymbolTMPRSS2
Binding site1805,1825
Score1.0
Seed1
Au0.368
Energy-23.2
Binding len20
Me-4.762
Phylopstem1.9232864933333333
Phylopflank2.0483762524999998
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure