Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTAAGCCAGGC
.((((((.((((((........&)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135110
GeneSymbolDNAJA3
Binding site2074,2088
Score1.0
Seed1
Au0.426
Energy-18.1
Binding len14
Me-7.075
Phylopstem-0.11456016666666664
Phylopflank-0.38029399249999996
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end0
Position3UTR
2D Structure