Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATATGGGCACCACTTTACATTGTGGTAAGACATTGCTTCTCATGGATCTGCTAGGTA
(((((((((((((((((((...&.)))))))))))........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135170
GeneSymbolC1QTNF7
Binding site2109,2168
Score0.846
Seed1
Au0.662
Energy-20.6
Binding len45
Me-3.938
Phylopstem-0.15119239999999995
Phylopflank0.08356176124999999
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end5
Position3UTR
2D Structure