Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCATAGAGAGGTTAAGCTAGTGG
((((((((((((((((.((...&)).))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135189
GeneSymbolAGFG1
Binding site5530,5553
Score1.0
Seed1
Au0.544
Energy-22.8
Binding len23
Me-3.938
Phylopstem0.2351919584210527
Phylopflank0.10141820324999999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure