Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGCTGCT
..((((((((((((((((((.&.))).))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419095
GeneSymbolRARS2
Binding site963,1020
Score0.923
Seed1
Au0.588
Energy-23.9
Binding len30
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure