Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCCTGGGGTGGAGGCCAGA
..((((((((.(((((((((((&)))))))..)))).)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135240
GeneSymbolC1orf226
Binding site1626,1650
Score0.846
Seed1
Au0.397
Energy-25.7
Binding len24
Me-7.782
Phylopstem0.1478888307692308
Phylopflank-0.12951732374999997
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure