Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGCCAGGA
.(((((((.(((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135245
GeneSymbolTCOF1
Binding site3088,3099
Score0.923
Seed1
Au0.397
Energy-15.0
Binding len11
Me-7.964
Phylopstem0.3736337142857143
Phylopflank0.6644662000000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure