Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGGCAGGGGCTGTAGCCTCCCAGACCAAGGCAGGGA
...((((((.(((((((((..&))))))))).........................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001135245
GeneSymbolTCOF1
Binding site778,819
Score0.846
Seed0
Au0.353
Energy-25.5
Binding len41
Me-7.757
Phylopstem0.7848353333333334
Phylopflank0.47191415625
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure