Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGAAGGAAAACGAAGAGCCAGA
..((((((((((((((((((((&)))))))))))))........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135254
GeneSymbolPAX7
Binding site5495,5524
Score1.0
Seed1
Au0.515
Energy-29.4
Binding len29
Me-4.957
Phylopstem0.31122578928571437
Phylopflank-0.09429414749999998
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure