Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135255
GeneSymbolRBBP4
Binding site4010,4034
Score0.923
Seed1
Au0.456
Energy-25.1
Binding len24
Me-3.938
Phylopstem-0.5265035434782608
Phylopflank-0.20285296875000008
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure