Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCAGGGTGTGCCAGA
..(((((((((..(((((((((&)))))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135553
GeneSymbolMKNK1
Binding site1038,1059
Score0.846
Seed1
Au0.382
Energy-27.3
Binding len21
Me-9.593
Phylopstem-0.06484973555555555
Phylopflank0.413584710375
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure