Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCATTTTGCCAGA
..((((((...((((((((((.&)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135597
GeneSymbolCCDC88A
Binding site7315,7333
Score0.877
Seed1
Au0.75
Energy-20.8
Binding len18
Me-10.081
Phylopstem5.532161799999999
Phylopflank4.230756448625
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure